Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888701.1_cds_XP_016443331.1_38500
CDS Infomation

[gene=LOC107768702] [db_xref=GeneID:107768702] [protein=oxysterol-binding protein-related protein 2A-like] [protein_id=XP_016443331.1] [location=join(50500..50859,52572..52931,54101..54194,55660..56042,56477..56632,57727..57894,58001..58141,58279..58500,58611..58724,59483..59662)] [gbkey=CDS]
Sequence

ATGCGTGTAAAGGAAATGCATCCACTTTGCTGTATAACATTAGAGAGTACATCGGAGATC
GGAGACCAGTCGCCGGAGCCGACGTTATTACGGACTGGCTCCGCCGTAGTTTACTCCAAT
ATTAATGGATCTGACATCATTAATGCATCCGATGTTGCCGGAATCTTGTACAAGTGGACT
AATTACCATAAAGGTTGGAGATCCCGTTGGTTTACTCTTCGAAACGGCATACTTTCATAT
TCGAAGAATCGCCGCCCCGACCATATCACCGGTGATGACGTCAGACTCATCGGTAACCTC
CCCGCCGGTAACAACAGCCGCCGTAAATGTAGAAAATCCGTCGGCATTGTTCACCTCAAG
GTTTCATCATTCCGTGAGAGCAAGTCTGATGATAGGCGATTCTACATATTTACATCTACC
AAGACTCTTCATTTGAGAACAAATTCAAAGAAAGAACGGGCTGCCTGGATAGAAGCTCTG
ATATCAACAAGAAATCTTTTTCAGTTGAGACCTTTAAATGATAATTTCAGCCTTTTGCAA
AATGATGTATCTATATCTACTGAAAGGTTGAAAAAACGGTTGCTTGACGAGGGTATTGGC
GAGGGACTTGTCAATGACTGTGAGCAGATCATGCTGTCCGAGTTTTCAGAAATAAAAGGA
CAACTTAAAAGTCTTTGTGACGAGCGCTCCAATTTGCTGGACACATTAAGTCAGTTGGAG
GCAGCTAATATCGAAGCTGAAGCTTCCGGGGTTCATGATGGTGAATTCCAACTGATGAAG
CAACTCTCCAGTATAGGGCGTGGCAAGTACAGCGAATGGAGTACGACTGAATCGTCCGAT
GATATTGAGAAACAAGAGCTTGATGAAGCGTCAGATGAAGAGGAAGCCAATTATCTTGAC
GCAAATGAATGTTTCTCTGAACTTCATTTATCTGGTGGGTCAGTAGTTGTGGACCACATG
GCAAGCAATTCCATTGATGCATCTGCACAAGTTACACGCAGAACGAAGCTGCCGGATCCA
ATTGAAAAAGAGAAAGGGGTTAGTCTTTGGTCTATGATCAAAGACAATGTCGGGAAAGAT
CTGACACGAGTTTGCCTGCCAGTGTATTTCAATGAGCCATTGTCGTCCCTGCAAAAGTGC
TTCGAAGATTTAGAGTACTCATATCTCTTAGATAGAGCATACGAACATGGAAAATCGGGG
AACAGCCTTTTAAGAATTCTAAATGTTGCTGCTTTTGCTGTCTCTGGTTATGCTTCAACC
GAAGGCCGGAACTGTAAACCTTTCAATCCTTTGCTTGGAGAAACTTATGAAGCTGATTTT
CCTGAGAAAGGAATCCGCTTTTTTTCTGAGAAGGTTAGTCACCACCCAACACTTATTGCC
TGTCACTGTGAAGGTAGAGGATGGAAATTCTGGGCTGACAGTAATCTTAAGTCAAAATTT
TGGGGAAGATCAATTCAACTTGATCCTGTTGGAACACTTACCTTAGAATTCGACGATGGG
GAGATCTTCCGGTGGAGCAAGGTCACGACAAGTATCTACAATCTTATCCTTGGTAAGATA
TACTGTGATCATCATGGAATAATGCATATACGTGGCAATCGCCAGTACTCATGCAAGCTC
AAGTTCAAAGAGCCATCCATTATCGAGCGTAATCCTCATCAGGTTCATGGATTTGTTGAA
GATGTCTCCGGGAAGAAAGTTGCCACATTATTCGGAAAGTGGAATGAGAGCATGTACTAT
ATGAATGGAGAATGGACCAGCAAGCCTAAGGATTCATCTGATTCATCTTTATTGTGGACA
AGGAATAAGCCACCCCTAAATCTAACTCGATACAACTTGTCTTCTTTTGCAATTACACTG
AATGAGTTAACACCAGGACTTAAGGAGAAGCTCCCACCTACAGATTCAAGACTCAGACCT
GATCAGCGACATCTGGAAAATGGGGAATACGACAAGGCAAATTCGGAGAAGTTGCGGTTA
GAAACACGACAGAGAATGTCCAGGAAATTACAAGAGAATGGTTGGAGACCGCGATGGTTT
CAAAGAGAAGGTGAAGATGGGACTTTCCGGTATACCGGTGGTTACTGGGAGGCGAGGGAG
ACGGGTACTTGGGATGGCTGCCCAAATATTTTTGGTGAGATTGATCAAGAGCTCCTCACC
TCCTTTGAAGGATCCTGA

Peptide Sequence

PEP ID

XP_016443331.1
PEP Infomation

PREDICTED: oxysterol-binding protein-related protein 2A-like [Nicotiana tabacum]
Sequence

MRVKEMHPLCCITLESTSEIGDQSPEPTLLRTGSAVVYSNINGSDIINASDVAGILYKWT
NYHKGWRSRWFTLRNGILSYSKNRRPDHITGDDVRLIGNLPAGNNSRRKCRKSVGIVHLK
VSSFRESKSDDRRFYIFTSTKTLHLRTNSKKERAAWIEALISTRNLFQLRPLNDNFSLLQ
NDVSISTERLKKRLLDEGIGEGLVNDCEQIMLSEFSEIKGQLKSLCDERSNLLDTLSQLE
AANIEAEASGVHDGEFQLMKQLSSIGRGKYSEWSTTESSDDIEKQELDEASDEEEANYLD
ANECFSELHLSGGSVVVDHMASNSIDASAQVTRRTKLPDPIEKEKGVSLWSMIKDNVGKD
LTRVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAYEHGKSGNSLLRILNVAAFAVSGYAST
EGRNCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNLKSKF
WGRSIQLDPVGTLTLEFDDGEIFRWSKVTTSIYNLILGKIYCDHHGIMHIRGNRQYSCKL
KFKEPSIIERNPHQVHGFVEDVSGKKVATLFGKWNESMYYMNGEWTSKPKDSSDSSLLWT
RNKPPLNLTRYNLSSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYDKANSEKLRL
ETRQRMSRKLQENGWRPRWFQREGEDGTFRYTGGYWEARETGTWDGCPNIFGEIDQELLT
SFEGS

Transcript Sequence

Gene sequence data has not been registered.